Python packages are available on github to (i) reconstruct 3D curves from orthogonal 2D projections:
https://github.com/icemtel/reconstruct3d_opt , (ii) create triangulated surface meshes and
solve hydrodynamic Stokes equation: https://github.com/icemtel/stokes, and (iii) study 
systems of coupled oscillators with couplings obtained from hydrodynamic computations
https://github.com/icemtel/carpet