SI.ConfigPageClass = 'dabs.resources.configuration.resourcePages.SIPage' SI.LINE_FORMAT_VERSION = 1 SI.PREMIUM = true SI.TIFF_FORMAT_VERSION = 4 SI.VERSION_COMMIT = '619cfaf81f8074e774b6fa6f129ba83013e36efe' SI.VERSION_MAJOR = 2020 SI.VERSION_MINOR = 1 SI.VERSION_UPDATE = 4 SI.acqState = 'grab' SI.acqsPerLoop = 1 SI.errorMsg = '' SI.extTrigEnable = false SI.fieldCurvatureRxs = [] SI.fieldCurvatureRys = [] SI.fieldCurvatureZs = [] SI.hBeams.enablePowerBox = false SI.hBeams.errorMsg = '' SI.hBeams.flybackBlanking = true SI.hBeams.hBeamRouters = {} SI.hBeams.hBeams = {'Beam 1'} SI.hBeams.hReserver = [] SI.hBeams.hUsers = {} SI.hBeams.interlaceDecimation = 1 SI.hBeams.interlaceOffset = 0 SI.hBeams.lengthConstants = Inf SI.hBeams.name = 'SI Beams' SI.hBeams.powerBoxEndFrame = Inf SI.hBeams.powerBoxStartFrame = 1 SI.hBeams.powerBoxes.rect = [0.25 0.25 0.5 0.5] SI.hBeams.powerBoxes.powers = NaN SI.hBeams.powerBoxes.name = '' SI.hBeams.powerBoxes.oddLines = true SI.hBeams.powerBoxes.evenLines = true SI.hBeams.powerFractionLimits = 1 SI.hBeams.powerFractions = 0.25 SI.hBeams.powers = 25 SI.hBeams.pzAdjust = false SI.hBeams.pzCustom = {[]} SI.hBeams.reserved = false SI.hBeams.reserverInfo = '' SI.hBeams.totalNumBeams = 1 SI.hBeams.userInfo = '' SI.hBeams.warnMsg = '' SI.hCameraManager.errorMsg = '' SI.hCameraManager.hReserver = [] SI.hCameraManager.hUsers = {} SI.hCameraManager.name = 'SI CameraManager' SI.hCameraManager.reserved = false SI.hCameraManager.reserverInfo = '' SI.hCameraManager.userInfo = '' SI.hCameraManager.warnMsg = '' SI.hChannels.channelAdcResolution = {14 14 14 14} SI.hChannels.channelDisplay = [1 2] SI.hChannels.channelInputRange = {[-1 1] [-1 1]} SI.hChannels.channelLUT = {[-592 259] [317 1690] [0 100] [0 100]} SI.hChannels.channelMergeColor = {'green' 'red' 'red' 'red'} SI.hChannels.channelName = {'Channel 1' 'Channel 2' 'Channel 3' 'Channel 4'} SI.hChannels.channelOffset = [316 -154] SI.hChannels.channelSave = [1 2] SI.hChannels.channelSubtractOffset = [true true] SI.hChannels.channelType = {'stripe' 'stripe' 'stripe' 'stripe'} SI.hChannels.channelsActive = [1 2] SI.hChannels.channelsAvailable = 2 SI.hChannels.errorMsg = '' SI.hChannels.hReserver = [] SI.hChannels.hUsers = {} SI.hChannels.loggingEnable = 1 SI.hChannels.name = 'SI Channels' SI.hChannels.reserved = false SI.hChannels.reserverInfo = '' SI.hChannels.userInfo = '' SI.hChannels.warnMsg = '' SI.hConfigurationSaver.cfgFilename = 'C:\Program Files\Vidrio\MDF AND CONFIG\SI2020\AD.cfg' SI.hConfigurationSaver.errorMsg = '' SI.hConfigurationSaver.hReserver = [] SI.hConfigurationSaver.hUsers = {} SI.hConfigurationSaver.name = 'SI ConfigurationSaver' SI.hConfigurationSaver.reserved = false SI.hConfigurationSaver.reserverInfo = '' SI.hConfigurationSaver.userInfo = '' SI.hConfigurationSaver.usrFilename = 'C:\Program Files\Vidrio\MDF AND CONFIG\SI2020\AD.usr' SI.hConfigurationSaver.warnMsg = '' SI.hCoordinateSystems.errorMsg = '' SI.hCoordinateSystems.hReserver = [] SI.hCoordinateSystems.hUsers = {} SI.hCoordinateSystems.name = 'SI CoordinateSystems' SI.hCoordinateSystems.reserved = false SI.hCoordinateSystems.reserverInfo = '' SI.hCoordinateSystems.userInfo = '' SI.hCoordinateSystems.warnMsg = '' SI.hCycleManager.cycleIterIdxTotal = 0 SI.hCycleManager.cyclesCompleted = 0 SI.hCycleManager.enabled = false SI.hCycleManager.errorMsg = '' SI.hCycleManager.hReserver = [] SI.hCycleManager.hUsers = {} SI.hCycleManager.itersCompleted = 0 SI.hCycleManager.name = 'SI CycleManager' SI.hCycleManager.reserved = false SI.hCycleManager.reserverInfo = '' SI.hCycleManager.totalCycles = 1 SI.hCycleManager.userInfo = '' SI.hCycleManager.warnMsg = '' SI.hDisplay.autoScaleSaturationFraction = [0.1 0.01] SI.hDisplay.channelsMergeEnable = true SI.hDisplay.channelsMergeFocusOnly = false SI.hDisplay.displayRollingAverageFactor = 1 SI.hDisplay.displayRollingAverageFactorLock = false SI.hDisplay.enableScanfieldDisplays = false SI.hDisplay.errorMsg = '' SI.hDisplay.hReserver = [] SI.hDisplay.hUsers = {} SI.hDisplay.lineScanHistoryLength = 1000 SI.hDisplay.name = 'SI Display' SI.hDisplay.renderer = 'auto' SI.hDisplay.reserved = false SI.hDisplay.reserverInfo = '' SI.hDisplay.scanfieldDisplayColumns = 5 SI.hDisplay.scanfieldDisplayRows = 5 SI.hDisplay.scanfieldDisplayTilingMode = 'Auto' SI.hDisplay.scanfieldDisplays.enable = false SI.hDisplay.scanfieldDisplays.name = 'Display 1' SI.hDisplay.scanfieldDisplays.channel = 1 SI.hDisplay.scanfieldDisplays.roi = 1 SI.hDisplay.scanfieldDisplays.z = 0 SI.hDisplay.selectedZs = [] SI.hDisplay.showScanfieldDisplayNames = true SI.hDisplay.userInfo = '' SI.hDisplay.volumeDisplayStyle = '3D' SI.hDisplay.warnMsg = '' SI.hFastZ.actuatorLag = 0 SI.hFastZ.discardFlybackFrames = false SI.hFastZ.enable = false SI.hFastZ.enableFieldCurveCorr = false SI.hFastZ.errorMsg = '' SI.hFastZ.flybackTime = 0 SI.hFastZ.hReserver = [] SI.hFastZ.hUsers = {} SI.hFastZ.hasFastZ = false SI.hFastZ.name = 'SI FastZ' SI.hFastZ.numDiscardFlybackFrames = 0 SI.hFastZ.position = 0 SI.hFastZ.reserved = false SI.hFastZ.reserverInfo = '' SI.hFastZ.userInfo = '' SI.hFastZ.volumePeriodAdjustment = -0.0006 SI.hFastZ.warnMsg = '' SI.hFastZ.waveformType = 'sawtooth' SI.hIntegrationRoiManager.enable = false SI.hIntegrationRoiManager.enableDisplay = true SI.hIntegrationRoiManager.errorMsg = '' SI.hIntegrationRoiManager.hReserver = [] SI.hIntegrationRoiManager.hUsers = {} SI.hIntegrationRoiManager.integrationHistoryLength = 1000 SI.hIntegrationRoiManager.name = 'SI IntegrationRoiManager' SI.hIntegrationRoiManager.outputChannelsEnabled = [] SI.hIntegrationRoiManager.outputChannelsFunctions = {} SI.hIntegrationRoiManager.outputChannelsNames = {} SI.hIntegrationRoiManager.outputChannelsPhysicalNames = {} SI.hIntegrationRoiManager.outputChannelsRoiNames = {} SI.hIntegrationRoiManager.postProcessFcn = '@scanimage.components.integrationRois.integrationPostProcessingFcn' SI.hIntegrationRoiManager.reserved = false SI.hIntegrationRoiManager.reserverInfo = '' SI.hIntegrationRoiManager.userInfo = '' SI.hIntegrationRoiManager.warnMsg = '' SI.hMotionManager.correctionBoundsXY = [-5 5] SI.hMotionManager.correctionBoundsZ = [-50 50] SI.hMotionManager.correctionDeviceXY = 'galvos' SI.hMotionManager.correctionDeviceZ = 'fastz' SI.hMotionManager.correctionEnableXY = false SI.hMotionManager.correctionEnableZ = false SI.hMotionManager.correctorClassName = 'scanimage.components.motionCorrectors.SimpleMotionCorrector' SI.hMotionManager.enable = false SI.hMotionManager.errorMsg = '' SI.hMotionManager.estimatorClassName = 'scanimage.components.motionEstimators.SimpleMotionEstimator' SI.hMotionManager.hReserver = [] SI.hMotionManager.hUsers = {} SI.hMotionManager.motionHistoryLength = 100 SI.hMotionManager.motionMarkersXY = zeros(0,2) SI.hMotionManager.name = 'SI MotionManager' SI.hMotionManager.reserved = false SI.hMotionManager.reserverInfo = '' SI.hMotionManager.resetCorrectionAfterAcq = true SI.hMotionManager.userInfo = '' SI.hMotionManager.warnMsg = '' SI.hMotionManager.zStackAlignmentFcn = '@scanimage.components.motionEstimators.util.alignZRoiData' SI.hMotors.ConfigPageClass = 'dabs.resources.configuration.resourcePages.SIMotorsPage' SI.hMotors.axesPosition = [27194.8 46863.9 27646.3] SI.hMotors.azimuth = 0 SI.hMotors.elevation = 0 SI.hMotors.errorMsg = '' SI.hMotors.errorTf = false SI.hMotors.hReserver = [] SI.hMotors.hUsers = {} SI.hMotors.isAligned = false SI.hMotors.isHomed = true SI.hMotors.isRelativeZeroSet = true SI.hMotors.maxZStep = Inf SI.hMotors.minPositionQueryInterval_s = 0.001 SI.hMotors.motorErrorMsg = {''} SI.hMotors.moveInProgress = false SI.hMotors.moveTimeout_s = 10 SI.hMotors.name = 'SI Motors' SI.hMotors.reserved = false SI.hMotors.reserverInfo = '' SI.hMotors.samplePosition = [-837.248 -2565.56 -509.587] SI.hMotors.simulatedAxes = [false false false] SI.hMotors.userDefinedPositions = [] SI.hMotors.userInfo = '' SI.hMotors.warnMsg = '' SI.hPhotostim.ConfigPageClass = 'dabs.resources.configuration.resourcePages.SIPhotostimPage' SI.hPhotostim.allowMultipleOutputs = false SI.hPhotostim.autoTriggerPeriod = 0 SI.hPhotostim.compensateMotionEnabled = true SI.hPhotostim.completedSequences = 0 SI.hPhotostim.errorMsg = '' SI.hPhotostim.hReserver = [] SI.hPhotostim.hUsers = {} SI.hPhotostim.laserActiveSignalAdvance = 0.001 SI.hPhotostim.lastMotion = [0 0] SI.hPhotostim.logging = false SI.hPhotostim.monitoring = false SI.hPhotostim.monitoringSampleRate = 9000 SI.hPhotostim.name = 'SI Photostim' SI.hPhotostim.nextStimulus = 1 SI.hPhotostim.numOutputs = 0 SI.hPhotostim.numSequences = Inf SI.hPhotostim.reserved = false SI.hPhotostim.reserverInfo = '' SI.hPhotostim.sequencePosition = 1 SI.hPhotostim.sequenceSelectedStimuli = [] SI.hPhotostim.status = 'Offline' SI.hPhotostim.stimImmediately = false SI.hPhotostim.stimSelectionAssignment = [] SI.hPhotostim.stimSelectionDevice = '' SI.hPhotostim.stimSelectionTerms = [] SI.hPhotostim.stimSelectionTriggerTerm = [] SI.hPhotostim.stimTriggerTerm = 1 SI.hPhotostim.stimulusMode = 'onDemand' SI.hPhotostim.syncTriggerTerm = [] SI.hPhotostim.userInfo = '' SI.hPhotostim.warnMsg = '' SI.hPhotostim.zMode = '2D' SI.hPmts.autoPower = zeros(1,0) SI.hPmts.bandwidths = zeros(1,0) SI.hPmts.errorMsg = '' SI.hPmts.gains = zeros(1,0) SI.hPmts.hReserver = [] SI.hPmts.hUsers = {} SI.hPmts.name = 'SI Pmts' SI.hPmts.names = {} SI.hPmts.offsets = zeros(1,0) SI.hPmts.powersOn = zeros(1,0) SI.hPmts.reserved = false SI.hPmts.reserverInfo = '' SI.hPmts.tripped = zeros(1,0) SI.hPmts.userInfo = '' SI.hPmts.warnMsg = '' SI.hReserver = [] SI.hRoiManager.errorMsg = '' SI.hRoiManager.forceSquarePixelation = true SI.hRoiManager.forceSquarePixels = true SI.hRoiManager.hReserver = [] SI.hRoiManager.hUsers = {} SI.hRoiManager.imagingFovDeg = [0.623588 0.107912;-0.211107 0.107912;-0.211107 0.184746;0.623588 0.184746] SI.hRoiManager.imagingFovUm = [44.7549 7.74486;-15.1512 7.74486;-15.1512 13.2592;44.7549 13.2592] SI.hRoiManager.linePeriod = 0.004 SI.hRoiManager.linesPerFrame = 512 SI.hRoiManager.mroiEnable = false SI.hRoiManager.name = 'SI RoiManager' SI.hRoiManager.pixelsPerLine = 512 SI.hRoiManager.reserved = false SI.hRoiManager.reserverInfo = '' SI.hRoiManager.scanAngleMultiplierFast = 1 SI.hRoiManager.scanAngleMultiplierSlow = 1 SI.hRoiManager.scanAngleShiftFast = 0 SI.hRoiManager.scanAngleShiftSlow = 0 SI.hRoiManager.scanFramePeriod = 0.004 SI.hRoiManager.scanFrameRate = 250 SI.hRoiManager.scanRotation = 0 SI.hRoiManager.scanType = 'line' SI.hRoiManager.scanVolumeRate = 250 SI.hRoiManager.scanZoomFactor = 7 SI.hRoiManager.userInfo = '' SI.hRoiManager.warnMsg = '' SI.hScan2D.ConfigPageClass = 'dabs.resources.configuration.resourcePages.LinScanPage' SI.hScan2D.beamClockDelay = 1.5e-06 SI.hScan2D.beamClockExtend = 0 SI.hScan2D.bidirectional = true SI.hScan2D.channelIDs = [0 1 2 3] SI.hScan2D.channelOffsets = [316 -154] SI.hScan2D.channels = {} SI.hScan2D.channelsAdcResolution = 14 SI.hScan2D.channelsAutoReadOffsets = true SI.hScan2D.channelsAvailable = 2 SI.hScan2D.channelsDataType = 'int16' SI.hScan2D.channelsFilter = 'None' SI.hScan2D.channelsInputRanges = {[-1 1] [-1 1]} SI.hScan2D.channelsInvert = [true true] SI.hScan2D.channelsSubtractOffsets = [true true] SI.hScan2D.errorMsg = '' SI.hScan2D.externalSampleClock = false SI.hScan2D.externalSampleClockRate = 8e+07 SI.hScan2D.fillFractionSpatial = 0.9 SI.hScan2D.fillFractionTemporal = 0.9 SI.hScan2D.flybackTimePerFrame = 0.001 SI.hScan2D.flytoTimePerScanfield = 0.001 SI.hScan2D.fovCornerPoints = [-7.245 -7.245;7.245 -7.245;7.245 7.245;-7.245 7.245] SI.hScan2D.hFastZs = {} SI.hScan2D.hReserver = [] SI.hScan2D.hUsers = {} SI.hScan2D.hasResonantMirror = false SI.hScan2D.hasXGalvo = true SI.hScan2D.laserTriggerDebounceTicks = 0 SI.hScan2D.laserTriggerPort = '' SI.hScan2D.laserTriggerSampleMaskEnable = false SI.hScan2D.laserTriggerSampleWindow = [0 1] SI.hScan2D.linePhase = 0.0001248 SI.hScan2D.lineScanFdbkSamplesPerFrame = [] SI.hScan2D.lineScanNumFdbkChannels = 2 SI.hScan2D.lineScanSamplesPerFrame = 5000 SI.hScan2D.logAverageFactor = 1 SI.hScan2D.logFileCounter = 7 SI.hScan2D.logFilePath = 'C:\Acquisition data\Alexander & Didrik' SI.hScan2D.logFileStem = 'file' SI.hScan2D.logFramesPerFile = Inf SI.hScan2D.logFramesPerFileLock = false SI.hScan2D.logOverwriteWarn = false SI.hScan2D.maskDisableAveraging = false SI.hScan2D.maxDisplayRate = 30 SI.hScan2D.maxSampleRate = 2.5e+06 SI.hScan2D.name = 'LinScanner' SI.hScan2D.nominalFovCornerPoints = [-7.245 -7.245;7.245 -7.245;7.245 7.245;-7.245 7.245] SI.hScan2D.parkSlmForAcquisition = true SI.hScan2D.physicalChannelsAvailable = 2 SI.hScan2D.pixelBinFactor = 4 SI.hScan2D.recordScannerFeedback = false SI.hScan2D.reserved = false SI.hScan2D.reserverInfo = '' SI.hScan2D.sampleRate = 1.25e+06 SI.hScan2D.sampleRateCtl = 250000 SI.hScan2D.sampleRateFdbk = 50000 SI.hScan2D.scanMode = 'linear' SI.hScan2D.scanPixelTimeMaxMinRatio = 1 SI.hScan2D.scanPixelTimeMean = 3.2e-06 SI.hScan2D.scannerFrequency = NaN SI.hScan2D.scannerToRefTransform = [1 0 0;0 1 0;0 0 1] SI.hScan2D.scannerType = 'GG' SI.hScan2D.settleTimeFraction = 0 SI.hScan2D.simulated = false SI.hScan2D.stripingEnable = true SI.hScan2D.stripingMaxRate = 10 SI.hScan2D.trigAcqEdge = 'rising' SI.hScan2D.trigAcqInTerm = '' SI.hScan2D.trigNextEdge = 'rising' SI.hScan2D.trigNextInTerm = '' SI.hScan2D.trigNextStopEnable = false SI.hScan2D.trigStopEdge = 'rising' SI.hScan2D.trigStopInTerm = '' SI.hScan2D.userInfo = '' SI.hScan2D.warnMsg = '' SI.hShutters.errorMsg = '' SI.hShutters.hReserver = [] SI.hShutters.hUsers = {} SI.hShutters.name = 'SI Shutters' SI.hShutters.reserved = false SI.hShutters.reserverInfo = '' SI.hShutters.userInfo = '' SI.hShutters.warnMsg = '' SI.hStackManager.actualNumSlices = 1 SI.hStackManager.actualNumVolumes = 1 SI.hStackManager.actualStackZStepSize = [] SI.hStackManager.arbitraryZs = [0;1] SI.hStackManager.boundedStackDefinition = 'numSlices' SI.hStackManager.centeredStack = false SI.hStackManager.closeShutterBetweenSlices = false SI.hStackManager.enable = false SI.hStackManager.errorMsg = '' SI.hStackManager.framesPerSlice = 150100 SI.hStackManager.hReserver = [] SI.hStackManager.hUsers = {} SI.hStackManager.name = 'SI StackManager' SI.hStackManager.numFastZActuators = 0 SI.hStackManager.numFramesPerVolume = 1 SI.hStackManager.numFramesPerVolumeWithFlyback = 1 SI.hStackManager.numSlices = 1 SI.hStackManager.numVolumes = 1 SI.hStackManager.reserved = false SI.hStackManager.reserverInfo = '' SI.hStackManager.stackActuator = 'motor' SI.hStackManager.stackDefinition = 'uniform' SI.hStackManager.stackEndPower = [] SI.hStackManager.stackFastWaveformType = 'sawtooth' SI.hStackManager.stackMode = 'slow' SI.hStackManager.stackReturnHome = true SI.hStackManager.stackStartPower = [] SI.hStackManager.stackZEndPos = [] SI.hStackManager.stackZStartPos = [] SI.hStackManager.stackZStepSize = 1 SI.hStackManager.useStartEndPowers = true SI.hStackManager.userInfo = '' SI.hStackManager.warnMsg = '' SI.hStackManager.zPowerReference = -509.587 SI.hStackManager.zs = 0 SI.hStackManager.zsAllActuators = 0 SI.hStackManager.zsRelative = zeros(1,0) SI.hUserFunctions.errorMsg = '' SI.hUserFunctions.hReserver = [] SI.hUserFunctions.hUsers = {} SI.hUserFunctions.name = 'SI UserFunctions' SI.hUserFunctions.reserved = false SI.hUserFunctions.reserverInfo = '' SI.hUserFunctions.userFunctionsCfg = [] SI.hUserFunctions.userFunctionsUsr = [] SI.hUserFunctions.userInfo = '' SI.hUserFunctions.warnMsg = '' SI.hUsers = {} SI.hWSConnector.communicationTimeout = 5 SI.hWSConnector.enable = false SI.hWSConnector.errorMsg = '' SI.hWSConnector.hReserver = [] SI.hWSConnector.hUsers = {} SI.hWSConnector.name = 'SI WSConnector' SI.hWSConnector.reserved = false SI.hWSConnector.reserverInfo = '' SI.hWSConnector.userInfo = '' SI.hWSConnector.warnMsg = '' SI.hWaveformManager.errorMsg = '' SI.hWaveformManager.hReserver = [] SI.hWaveformManager.hUsers = {} SI.hWaveformManager.name = 'SI WaveformManager' SI.hWaveformManager.optimizedScanners = {} SI.hWaveformManager.reserved = false SI.hWaveformManager.reserverInfo = '' SI.hWaveformManager.userInfo = '' SI.hWaveformManager.warnMsg = '' SI.imagingSystem = 'LinScanner' SI.loopAcqInterval = 10 SI.name = 'ScanImage' SI.objectiveResolution = 71.77 SI.reserved = false SI.reserverInfo = '' SI.shutDownScript = '' SI.startUpScript = '' SI.userInfo = '' SI.warnMsg = '' { "RoiGroups": { "imagingRoiGroup": { "ver": 1, "classname": "scanimage.mroi.RoiGroup", "name": "Line Scanning ROI Group", "UserData": null, "roiUuid": "D13AC8ABC660883F", "roiUuiduint64": 1.507658334e+19, "rois": { "ver": 1, "classname": "scanimage.mroi.Roi", "name": "", "UserData": null, "roiUuid": "248C2178967B699E", "roiUuiduint64": 2.633516684e+18, "zs": 0, "scanfields": { "ver": 1, "classname": "scanimage.mroi.scanfield.fields.StimulusField", "name": "", "UserData": null, "roiUuid": "36953E666D1103E2", "roiUuiduint64": 3.933118459e+18, "centerXY": [0.206240541,0.1463292444], "sizeXY": [-0.834695754,0.07683391878], "rotationDegrees": 0, "enable": 1, "stimulusFunction": "scanimage.mroi.stimulusfunctions.line", "stimparams": [ "revolutions", 5 ], "duration": 0.004, "repetitions": 1, "powers": null, "zSpan": 0, "beamsFunction": "scanimage.mroi.stimulusbeamfunctions.beamPowers", "slmPattern": null }, "discretePlaneMode": 0, "powers": null, "pzAdjust": null, "Lzs": null, "interlaceDecimation": null, "interlaceOffset": null, "enable": 1 } }, "photostimRoiGroups": null, "integrationRoiGroup": { "ver": 1, "classname": "scanimage.mroi.RoiGroup", "name": "", "UserData": null, "roiUuid": "B2F6B12D818666BE", "roiUuiduint64": 1.289568939e+19, "rois": { "_ArrayType_": "double", "_ArraySize_": [1,0], "_ArrayData_": null } } } }