#!/bin/bash

#export JOB="pi_plc_pc50-pg50"
export JOB="pi_plc_dmpg_100"
#export WORKDIR=/work/hkh041/pi_plc_dmpc_pg_50_50_new_system/inp
#export WORKDIR=/work/hkh041/pi_plc_dmpg_100_1st_run/inp

cd $WORKDIR

i=`qsub -l walltime=00:30:00                         -vNAMDFILE=namd_min.conf,WORKDIR=$WORKDIR submit_namd_64`
j=`qsub -l walltime=02:30:00   -W depend=afterok:$i  -vNAMDFILE=namd_equil1.conf,WORKDIR=$WORKDIR submit_namd_128`
k=`qsub -l walltime=04:30:00   -W depend=afterok:$j  -vNAMDFILE=namd_equil2.conf,WORKDIR=$WORKDIR submit_namd_256`
l=`qsub -l walltime=04:30:00   -W depend=afterok:$k  -vNAMDFILE=namd_equil3.conf,WORKDIR=$WORKDIR submit_namd_256`
m=`qsub -l walltime=100:00:00   -W depend=afterok:$l -vNAMDFILE=namd_prod1.conf,WORKDIR=$WORKDIR submit_namd_512`

#n=`qsub -l walltime=150:00:00  -vNAMDFILE=namd_prod2.conf,WORKDIR=$WORKDIR submit_namd_512`
#n=`qsub -l walltime=100:00:00  -vNAMDFILE=namd_prod3.conf,WORKDIR=$WORKDIR submit_namd_512`
#n=`qsub -l walltime=100:00:00  -vNAMDFILE=namd_prod4.conf,WORKDIR=$WORKDIR submit_namd_512`
#n=`qsub -l walltime=100:00:00  -vNAMDFILE=namd_prod5.conf,WORKDIR=$WORKDIR submit_namd_512`
#n=`qsub -l walltime=100:00:00  -vNAMDFILE=namd_prod6.conf,WORKDIR=$WORKDIR submit_namd_512`
#n=`qsub -l walltime=100:00:00  -vNAMDFILE=namd_prod7.conf,WORKDIR=$WORKDIR submit_namd_512`
#n=`qsub -l walltime=100:00:00  -vNAMDFILE=namd_prod8.conf,WORKDIR=$WORKDIR submit_namd_512`
#n=`qsub -l walltime=100:00:00  -vNAMDFILE=namd_prod9.conf,WORKDIR=$WORKDIR submit_namd_512`
#n=`qsub -l walltime=100:00:00  -vNAMDFILE=namd_prod10.conf,WORKDIR=$WORKDIR submit_namd_512`

#n=`qsub -l walltime=133:00:00  -vNAMDFILE=namd_prod3.conf,WORKDIR=$WORKDIR submit_namd_512`
#n=`qsub -l walltime=100:00:00  -vNAMDFILE=namd_prod4.conf,WORKDIR=$WORKDIR submit_namd_512`
#n=`qsub -l walltime=96:00:00  -vNAMDFILE=namd_prod5.conf,WORKDIR=$WORKDIR submit_namd_512`
#n=`qsub -l walltime=72:00:00  -vNAMDFILE=namd_prod6.conf,WORKDIR=$WORKDIR submit_namd_512`
#n=`qsub -l walltime=96:00:00  -vNAMDFILE=namd_prod7.conf,WORKDIR=$WORKDIR submit_namd_512`
#n=`qsub -l walltime=50:00:00  -vNAMDFILE=namd_prod8.conf,WORKDIR=$WORKDIR submit_namd_512`
#n=`qsub -l walltime=50:00:00  -vNAMDFILE=namd_prod9.conf,WORKDIR=$WORKDIR submit_namd_512`
#n=`qsub -l walltime=48:00:00  -vNAMDFILE=namd_prod10.conf,WORKDIR=$WORKDIR submit_namd_512`
#n=`qsub -l walltime=48:00:00  -vNAMDFILE=namd_prod11.conf,WORKDIR=$WORKDIR submit_namd_512`
#n=`qsub -l walltime=48:00:00  -vNAMDFILE=namd_prod12.conf,WORKDIR=$WORKDIR submit_namd_512`
#n=`qsub -l walltime=48:00:00  -vNAMDFILE=namd_prod13.conf,WORKDIR=$WORKDIR submit_namd_512`
#n=`qsub -l walltime=72:00:00  -vNAMDFILE=namd_prod14.conf,WORKDIR=$WORKDIR submit_namd_512`
#n=`qsub -l walltime=48:00:00  -vNAMDFILE=namd_prod15.conf,WORKDIR=$WORKDIR submit_namd_512`
#n=`qsub -l walltime=48:00:00  -vNAMDFILE=namd_prod16.conf,WORKDIR=$WORKDIR submit_namd_512`
#n=`qsub -l walltime=48:00:00  -vNAMDFILE=namd_prod17.conf,WORKDIR=$WORKDIR submit_namd_512`