;
;	File 'topol.top' was generated
;	By user: onbekend (0)
;	On host: onbekend
;	At date: Wed Oct 24 16:00:11 2012
;
;	This is a standalone topology file
;
;	It was generated using program:
;	pdb2gmx - VERSION 4.5.3
;
;	Command line was:
;	pdb2gmx -f 1J4N_only.pdb -o 1J4N_H.pdb -ignh 
;
;	Force field was read from the standard Gromacs share directory.
;

; Include forcefield parameters
#include "charmm36-nov2014.ff/forcefield.itp"
#include "Protein_A_aa.itp"
#include "popc.itp"
#include "chol.itp"

; Include water topology
#include "charmm36-nov2014.ff/tip3p.itp"

#ifdef POSRES_WATER
; Position restraint for each water oxygen
[ position_restraints ]
;  i funct       fcx        fcy        fcz
   1    1       1000       1000       1000
#endif

; Include topology for ions
#include "charmm36-nov2014.ff/ions.itp"

[ system ]
; Name
CTH

[ molecules ]
; Compound        #mols
Protein_chain_A    1
POPC            53
CHOL            23
POPC            53
CHOL            23
;SOL 	       2828	; water and ions do not need to be included before backmapping