* Timeseries template input * set dcd wt_lz.dyna_prod1 set inp wt_lz.dyna_desolv !!!!!!!!!!!!!!!!!!!!!!!!!!! ! Topology, parameters and PSF !!!!!!!!!!!!!!!!!!!!!!!!!!! open unit 1 card read name ../lib/top_all27_prot_na.rtf read RTF card unit 1 close unit 1 open unit 1 card read name ../lib/par_all27_prot_na.prm read PARA card unit 1 close unit 1 stream ../lib/aco.rtf ! Read in psf and coordinates open read formatted unit 20 name ../scr/@inp.psf read psf card unit 20 open read formatted unit 21 name ../scr/@inp.crd read coor card unit 21 coor copy comp OPEN UNIT 14 READ unformatted NAME ../scr/@dcd.cor open unit 98 write form name z1n_aco.ts correl maxseries 12 maxtimesteps 10000000 maxatom 15 enter ts1 bond z 1 n l 156 s1p enter ts2 bond z 1 n l 156 o enter ts3 bond z 1 n l 156 c trajectory firstunit 14 nunits 1 skip 500 begin 0 stop 10000000 edit ts1 veccode 3! veccode as maxseries indicates the number of timeseries here two... write ts1 unit 98 card *# JOBNAME: h-bonds * stop