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Now handling font encoding OT1 ...
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File: ot1enc.dfu 2016/02/28 v1.1s UTF-8 support for inputenc
   defining Unicode char U+00A0 (decimal 160)
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)
Now handling font encoding OMS ...
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   defining Unicode char U+00A7 (decimal 167)
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)
Now handling font encoding OMX ...
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Now handling font encoding U ...
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))
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./protrusion_ms_suppmat.tex:6: Undefined control sequence.
<argument> ... hull for the same protein. All \ca 
                                                  /- and \cb /-atoms are sho...
l.6 \externalcitedocument
                         {protrusion_ms}
The control sequence at the end of the top line
of your error message was never \def'ed. If you have
misspelled it (e.g., `\hobx'), type `I' and the correct
spelling (e.g., `I\hbox'). Otherwise just continue,
and I'll forget about whatever was undefined.

./protrusion_ms_suppmat.tex:6: Undefined control sequence.
<argument> ...he same protein. All \ca /- and \cb 
                                                  /-atoms are shown as spher...
l.6 \externalcitedocument
                         {protrusion_ms}
The control sequence at the end of the top line
of your error message was never \def'ed. If you have
misspelled it (e.g., `\hobx'), type `I' and the correct
spelling (e.g., `I\hbox'). Otherwise just continue,
and I'll forget about whatever was undefined.

./protrusion_ms_suppmat.tex:6: Undefined control sequence.
<argument> ...orange. The convex hull for the \ca 
                                                  /- and \cb /-atomic coordi...
l.6 \externalcitedocument
                         {protrusion_ms}
The control sequence at the end of the top line
of your error message was never \def'ed. If you have
misspelled it (e.g., `\hobx'), type `I' and the correct
spelling (e.g., `I\hbox'). Otherwise just continue,
and I'll forget about whatever was undefined.

./protrusion_ms_suppmat.tex:6: Undefined control sequence.
<argument> ... convex hull for the \ca /- and \cb 
                                                  /-atomic coordinates is sh...
l.6 \externalcitedocument
                         {protrusion_ms}
The control sequence at the end of the top line
of your error message was never \def'ed. If you have
misspelled it (e.g., `\hobx'), type `I' and the correct
spelling (e.g., `I\hbox'). Otherwise just continue,
and I'll forget about whatever was undefined.

./protrusion_ms_suppmat.tex:6: Undefined control sequence.
<argument> ...e peripheral proteins (\periphcolor 
                                                  /) and the reference set (...
l.6 \externalcitedocument
                         {protrusion_ms}
The control sequence at the end of the top line
of your error message was never \def'ed. If you have
misspelled it (e.g., `\hobx'), type `I' and the correct
spelling (e.g., `I\hbox'). Otherwise just continue,
and I'll forget about whatever was undefined.

./protrusion_ms_suppmat.tex:6: Undefined control sequence.
<argument> ... /) and the reference set (\tmcolor 
                                                  /). The horizontal axes sh...
l.6 \externalcitedocument
                         {protrusion_ms}
The control sequence at the end of the top line
of your error message was never \def'ed. If you have
misspelled it (e.g., `\hobx'), type `I' and the correct
spelling (e.g., `I\hbox'). Otherwise just continue,
and I'll forget about whatever was undefined.

./protrusion_ms_suppmat.tex:6: Undefined control sequence.
<argument> ...sion, measured as the number of \ca 
                                                  / and \cb / atoms within $...
l.6 \externalcitedocument
                         {protrusion_ms}
The control sequence at the end of the top line
of your error message was never \def'ed. If you have
misspelled it (e.g., `\hobx'), type `I' and the correct
spelling (e.g., `I\hbox'). Otherwise just continue,
and I'll forget about whatever was undefined.

./protrusion_ms_suppmat.tex:6: Undefined control sequence.
<argument> ...ured as the number of \ca / and \cb 
                                                  / atoms within $1 nm$. Ver...
l.6 \externalcitedocument
                         {protrusion_ms}
The control sequence at the end of the top line
of your error message was never \def'ed. If you have
misspelled it (e.g., `\hobx'), type `I' and the correct
spelling (e.g., `I\hbox'). Otherwise just continue,
and I'll forget about whatever was undefined.

./protrusion_ms_suppmat.tex:6: Undefined control sequence.
<argument> ...isely, the vertical axis shows $\OR 
                                                  {A, B,\hat {F}_{\mathrm {h...
l.6 \externalcitedocument
                         {protrusion_ms}
The control sequence at the end of the top line
of your error message was never \def'ed. If you have
misspelled it (e.g., `\hobx'), type `I' and the correct
spelling (e.g., `I\hbox'). Otherwise just continue,
and I'll forget about whatever was undefined.

./protrusion_ms_suppmat.tex:6: Undefined control sequence.
<argument> ... protein density defined in~\matmet 
                                                  /. Error bars are 95\% con...
l.6 \externalcitedocument
                         {protrusion_ms}
The control sequence at the end of the top line
of your error message was never \def'ed. If you have
misspelled it (e.g., `\hobx'), type `I' and the correct
spelling (e.g., `I\hbox'). Otherwise just continue,
and I'll forget about whatever was undefined.

./protrusion_ms_suppmat.tex:6: Undefined control sequence.
<argument> ...isely, we show the comparisons $\OR 
                                                  {set,null,\hat {F}^{\mathr...
l.6 \externalcitedocument
                         {protrusion_ms}
The control sequence at the end of the top line
of your error message was never \def'ed. If you have
misspelled it (e.g., `\hobx'), type `I' and the correct
spelling (e.g., `I\hbox'). Otherwise just continue,
and I'll forget about whatever was undefined.

./protrusion_ms_suppmat.tex:6: Undefined control sequence.
<argument> ...f peripheral proteins (\periphcolor 
                                                  /) and the reference set (...
l.6 \externalcitedocument
                         {protrusion_ms}
The control sequence at the end of the top line
of your error message was never \def'ed. If you have
misspelled it (e.g., `\hobx'), type `I' and the correct
spelling (e.g., `I\hbox'). Otherwise just continue,
and I'll forget about whatever was undefined.

./protrusion_ms_suppmat.tex:6: Undefined control sequence.
<argument> ... /) and the reference set (\tmcolor 
                                                  /), and $null$ represent t...
l.6 \externalcitedocument
                         {protrusion_ms}
The control sequence at the end of the top line
of your error message was never \def'ed. If you have
misspelled it (e.g., `\hobx'), type `I' and the correct
spelling (e.g., `I\hbox'). Otherwise just continue,
and I'll forget about whatever was undefined.

./protrusion_ms_suppmat.tex:6: Undefined control sequence.
<argument> ...protrusions as described in~\matmet 
                                                  /. Error bars are 95\% con...
l.6 \externalcitedocument
                         {protrusion_ms}
The control sequence at the end of the top line
of your error message was never \def'ed. If you have
misspelled it (e.g., `\hobx'), type `I' and the correct
spelling (e.g., `I\hbox'). Otherwise just continue,
and I'll forget about whatever was undefined.

./protrusion_ms_suppmat.tex:6: Undefined control sequence.
<argument> ...e peripheral proteins (\periphcolor 
                                                  /) and the reference set (...
l.6 \externalcitedocument
                         {protrusion_ms}
The control sequence at the end of the top line
of your error message was never \def'ed. If you have
misspelled it (e.g., `\hobx'), type `I' and the correct
spelling (e.g., `I\hbox'). Otherwise just continue,
and I'll forget about whatever was undefined.

./protrusion_ms_suppmat.tex:6: Undefined control sequence.
<argument> ... /) and the reference set (\tmcolor 
                                                  /). We have differentiated...
l.6 \externalcitedocument
                         {protrusion_ms}
The control sequence at the end of the top line
of your error message was never \def'ed. If you have
misspelled it (e.g., `\hobx'), type `I' and the correct
spelling (e.g., `I\hbox'). Otherwise just continue,
and I'll forget about whatever was undefined.

./protrusion_ms_suppmat.tex:6: Undefined control sequence.
<argument> ...he convex hull (in blue) of the \ca 
                                                  / and \cb /-atoms of selec...
l.6 \externalcitedocument
                         {protrusion_ms}
The control sequence at the end of the top line
of your error message was never \def'ed. If you have
misspelled it (e.g., `\hobx'), type `I' and the correct
spelling (e.g., `I\hbox'). Otherwise just continue,
and I'll forget about whatever was undefined.

./protrusion_ms_suppmat.tex:6: Undefined control sequence.
<argument> ...hull (in blue) of the \ca / and \cb 
                                                  /-atoms of selected periph...
l.6 \externalcitedocument
                         {protrusion_ms}
The control sequence at the end of the top line
of your error message was never \def'ed. If you have
misspelled it (e.g., `\hobx'), type `I' and the correct
spelling (e.g., `I\hbox'). Otherwise just continue,
and I'll forget about whatever was undefined.

./protrusion_ms_suppmat.tex:6: Undefined control sequence.
<argument> ...l membrane binding domains. The \cb 
                                                  /-atoms of \emph {the Like...
l.6 \externalcitedocument
                         {protrusion_ms}
The control sequence at the end of the top line
of your error message was never \def'ed. If you have
misspelled it (e.g., `\hobx'), type `I' and the correct
spelling (e.g., `I\hbox'). Otherwise just continue,
and I'll forget about whatever was undefined.

./protrusion_ms_suppmat.tex:6: Undefined control sequence.
<argument> ...are shown as orange spheres and \cb 
                                                  /-atoms of experimentally ...
l.6 \externalcitedocument
                         {protrusion_ms}
The control sequence at the end of the top line
of your error message was never \def'ed. If you have
misspelled it (e.g., `\hobx'), type `I' and the correct
spelling (e.g., `I\hbox'). Otherwise just continue,
and I'll forget about whatever was undefined.

./protrusion_ms_suppmat.tex:6: Undefined control sequence.
<argument> ...s marked with a cross at 180\degree 
                                                  . Interestingly, while our...
l.6 \externalcitedocument
                         {protrusion_ms}
The control sequence at the end of the top line
of your error message was never \def'ed. If you have
misspelled it (e.g., `\hobx'), type `I' and the correct
spelling (e.g., `I\hbox'). Otherwise just continue,
and I'll forget about whatever was undefined.

./protrusion_ms_suppmat.tex:6: Undefined control sequence.
<argument> ...in each family (measured at the \ca 
                                                  /-atom). Values greater th...
l.6 \externalcitedocument
                         {protrusion_ms}
The control sequence at the end of the top line
of your error message was never \def'ed. If you have
misspelled it (e.g., `\hobx'), type `I' and the correct
spelling (e.g., `I\hbox'). Otherwise just continue,
and I'll forget about whatever was undefined.

./protrusion_ms_suppmat.tex:6: Undefined control sequence.
<argument> ...$, and panel B the comparisons $\OR 
                                                  {A,B, \hat {F}_{\mathrm {h...
l.6 \externalcitedocument
                         {protrusion_ms}
The control sequence at the end of the top line
of your error message was never \def'ed. If you have
misspelled it (e.g., `\hobx'), type `I' and the correct
spelling (e.g., `I\hbox'). Otherwise just continue,
and I'll forget about whatever was undefined.

./protrusion_ms_suppmat.tex:6: Undefined control sequence.
<argument> ...m peripheral proteins (\periphcolor 
                                                  /) and from proteins in th...
l.6 \externalcitedocument
                         {protrusion_ms}
The control sequence at the end of the top line
of your error message was never \def'ed. If you have
misspelled it (e.g., `\hobx'), type `I' and the correct
spelling (e.g., `I\hbox'). Otherwise just continue,
and I'll forget about whatever was undefined.

./protrusion_ms_suppmat.tex:6: Undefined control sequence.
<argument> ...eins in the reference set (\tmcolor 
                                                  /). In panel B, the contra...
l.6 \externalcitedocument
                         {protrusion_ms}
The control sequence at the end of the top line
of your error message was never \def'ed. If you have
misspelled it (e.g., `\hobx'), type `I' and the correct
spelling (e.g., `I\hbox'). Otherwise just continue,
and I'll forget about whatever was undefined.

./protrusion_ms_suppmat.tex:6: Undefined control sequence.
<argument> ...y the vertical axis denote $\ln \OR 
                                                  {\mathrm {peripheral}, \ma...
l.6 \externalcitedocument
                         {protrusion_ms}
The control sequence at the end of the top line
of your error message was never \def'ed. If you have
misspelled it (e.g., `\hobx'), type `I' and the correct
spelling (e.g., `I\hbox'). Otherwise just continue,
and I'll forget about whatever was undefined.

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