#!/bin/bash

mkdir -p data/olga/run_3/seqcount_100000/randomly_generated_repertoires/
for i in {1..200}
do
   new_seed=$(($i+90000+90))
   echo “###### Repertoire $i”
   olga-generate_sequences --humanTRB -o data/olga/run_3/seqcount_100000/randomly_generated_repertoires/rep_$i.tsv -n 100000 --seed=$new_seed
done

gen_metadata_file --dir_path data/olga/run_3/seqcount_100000/randomly_generated_repertoires