CAM atmosphere model initialization Initialize PIO subsystem: iotype = 5 ------------------------------------------ *********** CAM LOG OUTPUT *************** ------------------------------------------ Branch of an earlier run ********** CASE = bwma1850.f09.y23.los_chocoyos.qboW.ensoP ********** UNSET ********** Time Manager Configuration ********** Calendar type: NO_LEAP Timestep size (seconds): 1800 Start date (yr mon day tod): 1 1 1 0 Stop date (yr mon day tod): 23 1 11 0 Reference date (yr mon day tod): 1 1 1 0 Current step number: 385441 Current date (yr mon day tod): 23 1 1 1800 ************************************************ SPMD SWAP_COMM OPTIONS: swap_comm_protocol = 4 swap_comm_maxreq = 128 SPMD FLOW CONTROL GATHER OPTION: fc_gather_flow_cntl = 64 PHYS_GRID options: Using PCOLS = 16 phys_loadbalance = 2 phys_twin_algorithm = 1 phys_alltoall = -1 chunks_per_thread = 1 (GETFIL): attempting to find local file bwma1850.f09.test1.cam.r.0023-01-01-00000.nc (GETFIL): using bwma1850.f09.test1.cam.r.0023-01-01-00000.nc in current working directory cam_initfiles_readnl options: Continuation of case: bwma1850.f09.test1 Branch run will start from file: bwma1850.f09.test1.cam.r.0023-01-01-00000.nc Maximum abs value of scale factor used to perturb initial conditions, pertlim = 0.000000000000000E+000 Summary of constituent module options: Read constituent initial values from initial file by default: T Read in cam_history_nl namelist from: atm_in Unless overridden by namelist input on a per-field basis (FINCL), All fields on history file 1 will have averaging flag A Unless overridden by namelist input on a per-field basis (FINCL), All fields on history file 2 will have averaging flag A Unless overridden by namelist input on a per-field basis (FINCL), All fields on history file 3 will have averaging flag A Unless overridden by namelist input on a per-field basis (FINCL), All fields on history file 4 will have averaging flag A Unless overridden by namelist input on a per-field basis (FINCL), All fields on history file 5 will have averaging flag A Unless overridden by namelist input on a per-field basis (FINCL), All fields on history file 6 will have averaging flag A Unless overridden by namelist input on a per-field basis (FINCL), All fields on history file 7 will have averaging flag A Unless overridden by namelist input on a per-field basis (FINCL), All fields on history file 8 will have averaging flag A Unless overridden by namelist input on a per-field basis (FINCL), All fields on history file 9 will have averaging flag I Initial conditions history files will be written yearly. Dry adiabatic adjustment applied to top N layers; N= 3 Dry adiabatic adjustment number of iterations for convergence = 15 MG microphysics namelist: micro_mg_version = 2 micro_mg_sub_version = 0 micro_mg_do_cldice = T micro_mg_do_cldliq = T micro_mg_num_steps = 1 microp_uniform = F micro_mg_dcs = 5.000000000000000E-004 micro_mg_berg_eff_factor = 1.00000000000000 micro_mg_precip_frac_method = in_cloud micro_do_sb_physics = F micro_mg_adjust_cpt = F micro_mg_nccons = F micro_mg_nicons = F micro_mg_ncnst = 100000000.000000 micro_mg_ninst = 100000.000000000 cld_sediment_readnl: cldsed_ice_stokes_fac = 1.797693134862316E+308 RRTMG radiation scheme parameters: Frequency (timesteps) of Shortwave Radiation calc: 2 Frequency (timesteps) of Longwave Radiation calc: 2 SW/LW calc done every timestep for first N steps. N= 0 Use average zenith angle: F Output spectrally resolved fluxes: F rad_cnst_readnl: Radiation constituent lists: list_init1: namelist input for climate list rad namelist spec: A:Q:H2O rad namelist spec: A:O2:O2 rad namelist spec: A:CO2:CO2 rad namelist spec: A:O3:O3 rad namelist spec: A:N2O:N2O rad namelist spec: A:CH4:CH4 rad namelist spec: N:CFC11STAR:CFC11 rad namelist spec: A:CFC12:CFC12 rad namelist spec: M:mam4_mode1:/cluster/work/users/hanbre/inputdata/atm/cam/ physprops/mam4_mode1_rrtmg_aeronetdust_sig1.6_dgnh.48_c140304.nc rad namelist spec: M:mam4_mode2:/cluster/work/users/hanbre/inputdata/atm/cam/ physprops/mam4_mode2_rrtmg_aitkendust_c141106.nc rad namelist spec: M:mam4_mode3:/cluster/work/users/hanbre/inputdata/atm/cam/ physprops/mam4_mode3_rrtmg_aeronetdust_sig1.2_dgnl.40_c150219.nc rad namelist spec: M:mam4_mode4:/cluster/work/users/hanbre/inputdata/atm/cam/ physprops/mam4_mode4_rrtmg_c130628.nc gas list for climate calculations A:H2O has constituents name:Q A:O3 has constituents name:O3 A:O2 has constituents name:O2 A:CO2 has constituents name:CO2 A:N2O has constituents name:N2O A:CH4 has constituents name:CH4 N:CFC11 has pbuf name:CFC11STAR A:CFC12 has constituents name:CFC12 bulk aerosol list for climate calculations modal aerosol list for climate calculations mam4_mode1 mam4_mode2 mam4_mode3 mam4_mode4 Mode Definitions name=mam4_mode1 type=accum src_a=A num_a=num_a1 src_c=N num_c=num_c1 src_a=A mmr_a=so4_a1 src_c=N mmr_c=so4_c1 type=sulfate prop file= /cluster/work/users/hanbre/inputdata/atm/cam/physprops/sulfate_rrtmg_c080918.nc src_a=A mmr_a=pom_a1 src_c=N mmr_c=pom_c1 type=p-organic prop file= /cluster/work/users/hanbre/inputdata/atm/cam/physprops/ocpho_rrtmg_c130709.nc src_a=A mmr_a=soa_a1 src_c=N mmr_c=soa_c1 type=s-organic prop file= /cluster/work/users/hanbre/inputdata/atm/cam/physprops/ocphi_rrtmg_c100508.nc src_a=A mmr_a=bc_a1 src_c=N mmr_c=bc_c1 type=black-c prop file= /cluster/work/users/hanbre/inputdata/atm/cam/physprops/bcpho_rrtmg_c100508.nc src_a=A mmr_a=dst_a1 src_c=N mmr_c=dst_c1 type=dust prop file= /cluster/work/users/hanbre/inputdata/atm/cam/physprops/dust_aeronet_rrtmg_c1411 06.nc src_a=A mmr_a=ncl_a1 src_c=N mmr_c=ncl_c1 type=seasalt prop file= /cluster/work/users/hanbre/inputdata/atm/cam/physprops/ssam_rrtmg_c100508.nc name=mam4_mode2 type=aitken src_a=A num_a=num_a2 src_c=N num_c=num_c2 src_a=A mmr_a=so4_a2 src_c=N mmr_c=so4_c2 type=sulfate prop file= /cluster/work/users/hanbre/inputdata/atm/cam/physprops/sulfate_rrtmg_c080918.nc src_a=A mmr_a=soa_a2 src_c=N mmr_c=soa_c2 type=s-organic prop file= /cluster/work/users/hanbre/inputdata/atm/cam/physprops/ocphi_rrtmg_c100508.nc src_a=A mmr_a=ncl_a2 src_c=N mmr_c=ncl_c2 type=seasalt prop file= /cluster/work/users/hanbre/inputdata/atm/cam/physprops/ssam_rrtmg_c100508.nc src_a=A mmr_a=dst_a2 src_c=N mmr_c=dst_c2 type=dust prop file= /cluster/work/users/hanbre/inputdata/atm/cam/physprops/dust_aeronet_rrtmg_c1411 06.nc name=mam4_mode3 type=coarse src_a=A num_a=num_a3 src_c=N num_c=num_c3 src_a=A mmr_a=dst_a3 src_c=N mmr_c=dst_c3 type=dust prop file= /cluster/work/users/hanbre/inputdata/atm/cam/physprops/dust_aeronet_rrtmg_c1411 06.nc src_a=A mmr_a=ncl_a3 src_c=N mmr_c=ncl_c3 type=seasalt prop file= /cluster/work/users/hanbre/inputdata/atm/cam/physprops/ssam_rrtmg_c100508.nc src_a=A mmr_a=so4_a3 src_c=N mmr_c=so4_c3 type=sulfate prop file= /cluster/work/users/hanbre/inputdata/atm/cam/physprops/sulfate_rrtmg_c080918.nc name=mam4_mode4 type=primary_carbon src_a=A num_a=num_a4 src_c=N num_c=num_c4 src_a=A mmr_a=pom_a4 src_c=N mmr_c=pom_c4 type=p-organic prop file= /cluster/work/users/hanbre/inputdata/atm/cam/physprops/ocpho_rrtmg_c130709.nc src_a=A mmr_a=bc_a4 src_c=N mmr_c=bc_c4 type=black-c prop file= /cluster/work/users/hanbre/inputdata/atm/cam/physprops/bcpho_rrtmg_c100508.nc epp_ionization_readnl:: epp_all_filepath = /cluster/work/users/hanbre/inputdata /atm/cam/solar/SolarForcingCMIP6piControl_c160921.nc epp_ionization_readnl:: epp_mee_filepath = NONE epp_ionization_readnl:: epp_spe_filepath = NONE epp_ionization_readnl:: epp_gcr_filepath = NONE solar_data_readnl: solar_const (W/m2) = -9999.00000000000 solar_data_readnl: solar_irrad_data_file = /cluster/work/users/hanbre/inputdata/atm/cam/solar/SolarForcingCMIP6piControl_c 160921.nc solar_data_readnl: solar_parms_data_file = /cluster/work/users/hanbre/inputdata/atm/cam/solar/SolarForcingCMIP6piControl_c 160921.nc solar_data_readnl: solar_euv_data_file = NONE solar_data_readnl: solar_wind_data_file = NONE solar_data_readnl: solar_data_type = FIXED solar_data_readnl: solar_data_ymd = 18500101 solar_data_readnl: solar_data_tod = 0 check_energy options: print_energy_errors = F Rayleigh friction not enabled. Read in dyn_fv_inparm namelist from: atm_in FV dycore configuration: Lagrangian time splits (fv_nsplit) = 16 Tracer time splits (fv_nslptrac) = 4 Vertical re-mapping time splits (fv_nspltvrm) = 4 Scheme in E-W direction (fv_iord) = 4 Scheme in N-S direction (fv_jord) = 4 Scheme for vertical mapping (fv_kord) = 4 Conservative dynamics (fv_conserve) = F Filtering c-grid winds (fv_filcw) = 0 FFT filter (fv_fft_flt) = 1 Divergence/velocity damping (fv_div24del2flag) = 4 Coef for 2nd order velocity damping (fv_del2coef) = 300000.000000000 Angular momentum (AM) correction (fv_am_correction) = F Apply AM fixer (fv_am_fixer) = F Level by level AM fixer (fv_am_fix_lbl) = F Enable AM diagnostics (fv_am_diag) = F spmd_readnl: Read in spmd_fv_inparm namelist from: atm_in FV grid decomposition: npr_y = 64 npr_z = 14 nprxy_x = 14 nprxy_y = 64 npes = 896 npes_yz= 896 npes_xy = 896 Decomposing tracers into 1 groups using multi-2d decomposition methodology non-transpose geopk communication method = F Z-parallel non-transpose geopk communication method = F modcomm transpose method = 0 modcomm geopk method = 0 modcomm gatscat method = 0 modc_sw_dynrun = 0 modc_hs_dynrun = T modc_send_dynrun = T modc_mxreq_dynrun = -1 modc_sw_cdcore = 0 modc_hs_cdcore = T modc_send_cdcore = T modc_mxreq_cdcore = -1 modc_sw_gather = 1 modc_hs_gather = T modc_send_gather = T modc_mxreq_gather = 64 modc_sw_scatter = 0 modc_hs_scatter = F modc_send_scatter = T modc_mxreq_scatter = -1 modc_sw_tracer = 0 modc_hs_tracer = T modc_send_tracer = T modc_mxreq_tracer = -1 modc_onetwo = 2 modc_tracers = 10 qneg_readnl : QNEG statistics will be collected and printed at the end of the run (GETFIL): attempting to find local file fv_0.9x1.25_nc3000_Nsw042_Nrs008_Co060_Fi001_ZR_sgh30_24km_GRNL_c170103.nc (GETFIL): using /cluster/work/users/hanbre/inputdata/atm/cam/topo/fv_0.9x1.25_nc3000_Nsw042_Nrs 008_Co060_Fi001_ZR_sgh30_24km_GRNL_c170103.nc hycoef_read: read hyai, hybi, hyam, hybm hycoef_read: read P0 value: 100000.000000000 Layer Locations (*1000) 1 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 2 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 3 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 4 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 5 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 6 0.0001 0.0000 0.0001 0.0001 0.0000 0.0001 7 0.0001 0.0000 0.0001 0.0001 0.0000 0.0001 8 0.0001 0.0000 0.0001 0.0002 0.0000 0.0002 9 0.0002 0.0000 0.0002 0.0003 0.0000 0.0003 10 0.0004 0.0000 0.0004 0.0005 0.0000 0.0005 11 0.0007 0.0000 0.0007 0.0009 0.0000 0.0009 12 0.0011 0.0000 0.0011 0.0015 0.0000 0.0015 13 0.0018 0.0000 0.0018 0.0024 0.0000 0.0024 14 0.0030 0.0000 0.0030 0.0040 0.0000 0.0040 15 0.0050 0.0000 0.0050 0.0066 0.0000 0.0066 16 0.0082 0.0000 0.0082 0.0108 0.0000 0.0108 17 0.0135 0.0000 0.0135 0.0179 0.0000 0.0179 18 0.0223 0.0000 0.0223 0.0296 0.0000 0.0296 19 0.0368 0.0000 0.0368 0.0487 0.0000 0.0487 20 0.0607 0.0000 0.0607 0.0799 0.0000 0.0799 21 0.0992 0.0000 0.0992 0.1283 0.0000 0.1283 22 0.1574 0.0000 0.1574 0.1981 0.0000 0.1981 23 0.2388 0.0000 0.2388 0.2920 0.0000 0.2920 24 0.3452 0.0000 0.3452 0.4102 0.0000 0.4102 25 0.4751 0.0000 0.4751 0.5535 0.0000 0.5535 26 0.6318 0.0000 0.6318 0.7305 0.0000 0.7305 27 0.8292 0.0000 0.8292 0.9559 0.0000 0.9559 28 1.0827 0.0000 1.0827 1.2448 0.0000 1.2448 29 1.4068 0.0000 1.4068 1.6128 0.0000 1.6128 30 1.8189 0.0000 1.8189 2.0793 0.0000 2.0793 31 2.3398 0.0000 2.3398 2.6674 0.0000 2.6674 32 2.9951 0.0000 2.9951 3.4049 0.0000 3.4049 33 3.8147 0.0000 3.8147 4.3246 0.0000 4.3246 34 4.8344 0.0000 4.8344 5.4654 0.0000 5.4654 35 6.0964 0.0000 6.0964 6.8729 0.0000 6.8729 36 7.6493 0.0000 7.6493 8.5997 0.0000 8.5997 37 9.5501 0.0000 9.5501 10.7071 0.0000 10.7071 38 11.8640 0.0000 11.8640 13.2648 0.0000 13.2648 39 14.6655 0.0000 14.6655 16.3518 0.0000 16.3518 40 18.0380 0.0000 18.0380 20.0568 0.0000 20.0568 41 22.0755 0.0000 22.0755 24.4790 0.0000 24.4790 42 26.8825 0.0000 26.8825 29.7280 0.0000 29.7280 43 32.5735 0.0000 32.5735 35.9233 0.0000 35.9233 44 39.2730 0.0000 39.2730 43.1938 0.0000 43.1938 45 47.1145 0.0000 47.1145 51.6775 0.0000 51.6775 46 56.2405 0.0000 56.2405 61.5205 0.0000 61.5205 47 66.8005 0.0000 66.8005 73.7510 0.0000 73.7510 48 80.7014 0.0000 80.7014 87.8212 0.0000 87.8212 49 94.9410 0.0000 94.9410 103.3171 0.0000 103.3171 50 111.6932 0.0000 111.6932 121.5472 0.0000 121.5472 51 131.4013 0.0000 131.4013 142.9940 0.0000 142.9940 52 154.5868 0.0000 154.5868 168.2251 0.0000 168.2251 53 181.8634 0.0000 181.8634 178.2307 19.6774 197.9081 54 174.5980 39.3548 213.9528 170.3243 62.5043 232.8286 55 166.0507 85.6538 251.7044 161.0229 112.8879 273.9108 56 155.9952 140.1221 296.1172 150.0803 172.1616 322.2419 57 144.1654 204.2012 348.3666 137.2069 241.8940 379.1009 58 130.2483 279.5869 409.8352 122.0619 323.9306 445.9926 59 113.8756 368.2744 482.1499 104.2447 420.4425 524.6872 60 94.6139 472.6106 567.2244 84.9792 524.7995 609.7787 61 75.3445 576.9885 652.3330 66.5017 624.8877 691.3894 62 57.6589 672.7870 730.4459 50.1968 713.2077 763.4045 63 42.7346 753.6284 796.3631 37.1887 783.6697 820.8584 64 31.6427 813.7110 845.3537 28.4319 831.1028 859.5348 65 25.2212 848.4946 873.7159 22.2090 864.8113 887.0202 66 19.1967 881.1279 900.3246 16.4074 896.2372 912.6445 67 13.6180 911.3464 924.9645 11.0746 925.1238 936.1984 68 8.5311 938.9012 947.4323 6.2550 951.2305 957.4855 69 3.9788 963.5598 967.5386 1.9894 974.3360 976.3254 70 0.0000 985.1122 985.1122 0.0000 992.5561 992.5561 71 0.0000 1000.0000 1000.0000 reference pressures (Pa) 1 0.0005 0.0006 0.0003 2 0.0007 0.0010 0.0005 3 0.0012 0.0016 0.0008 4 0.0020 0.0027 0.0013 5 0.0033 0.0044 0.0022 6 0.0055 0.0073 0.0036 7 0.0090 0.0120 0.0059 8 0.0149 0.0197 0.0097 9 0.0246 0.0325 0.0159 10 0.0405 0.0537 0.0263 11 0.0668 0.0885 0.0433 12 0.1101 0.1458 0.0714 13 0.1816 0.2405 0.1178 14 0.2993 0.3978 0.1969 15 0.4963 0.6557 0.3188 16 0.8151 1.0814 0.5326 17 1.3477 1.7898 0.8842 18 2.2319 2.9558 1.4478 19 3.6797 4.8731 2.3868 20 6.0665 7.9911 3.8492 21 9.9157 12.8273 5.8233 22 15.7390 19.8120 8.1460 23 23.8850 29.2025 10.6350 24 34.5200 41.0168 12.9935 25 47.5135 55.3470 15.6670 26 63.1805 73.0480 19.7350 27 82.9155 95.5948 25.3585 28 108.2740 124.4795 32.4110 29 140.6850 161.2850 41.2000 30 181.8850 207.9325 52.0950 31 233.9800 266.7425 65.5250 32 299.5050 340.4875 81.9650 33 381.4700 432.4575 101.9750 34 483.4450 546.5400 126.1900 35 609.6350 687.2850 155.3000 36 764.9350 859.9725 190.0750 37 955.0100 1070.7050 231.3900 38 1186.4000 1326.4750 280.1500 39 1466.5500 1635.1751 337.2501 40 1803.8001 2005.6751 403.7499 41 2207.5500 2447.9000 480.6999 42 2688.2499 2972.7999 569.0999 43 3257.3499 3592.3250 669.9502 44 3927.3001 4319.3750 784.1498 45 4711.4499 5167.7499 912.6000 46 5624.0499 6152.0498 1055.9998 47 6680.0497 7375.0958 1390.0921 48 8070.1418 8782.1230 1423.9624 49 9494.1042 10331.7127 1675.2169 50 11169.3211 12154.7241 1970.8060 51 13140.1271 14299.4039 2318.5536 52 15458.6807 16822.5080 2727.6546 53 18186.3353 19790.8087 3208.9468 54 21395.2821 23282.8619 3775.1596 55 25170.4417 27391.0817 4441.2799 56 29611.7216 32224.1902 5224.9372 57 34836.6588 37910.0904 6146.8631 58 40983.5219 44599.2574 7231.4709 59 48214.9929 52468.7175 8507.4492 60 56722.4421 60977.8695 8510.8548 61 65233.2969 69138.9430 7811.2923 62 73044.5892 76340.4481 6591.7179 63 79636.3071 82085.8369 4899.0596 64 84535.3667 85953.4767 2836.2200 65 87371.5866 88702.0249 2660.8765 66 90032.4631 91264.4547 2463.9831 67 92496.4462 93619.8398 2246.7872 68 94743.2335 95748.5480 2010.6290 69 96753.8625 97632.5407 1757.3566 70 98511.2190 99255.6095 1488.7810 71 100000.0000 MOD_COMM - modcam_npryz = 64 14 14 64 MOD_COMM - modcam_tagoffset = 896 MOD_COMM - modcam_method modcam_geopk modcam_gatscat modcam_maxirr = 0 0 0 10 Using local dynamic storage for mod_comm window Mod_comm - ghostrat = 3.00000000000000 Mod_comm - geopkrat = 2.60000000000000 (MOD_COMM) - mod_comm not being used for dynamcis-physics transposes Mod_comm - tracmax dpvarmax totvar tracbmax = 1 0 1 1 Mod_comm - r4 windows disabled Mod_comm t1_win window size = 245376 Mod_comm r8_win window size = 552960 Mod_comm r4_win window size = 1 Mod_comm i4_win window size = 1 nlat_p( 0 ) = 3 nlat_p( 1 ) = 3 nlat_p( 2 ) = 3 nlat_p( 3 ) = 3 nlat_p( 4 ) = 3 nlat_p( 5 ) = 3 nlat_p( 6 ) = 3 nlat_p( 7 ) = 3 nlat_p( 8 ) = 3 nlat_p( 9 ) = 3 nlat_p( 10 ) = 3 nlat_p( 11 ) = 3 nlat_p( 12 ) = 3 nlat_p( 13 ) = 3 nlat_p( 14 ) = 3 nlat_p( 15 ) = 3 nlat_p( 16 ) = 3 nlat_p( 17 ) = 3 nlat_p( 18 ) = 3 nlat_p( 19 ) = 3 nlat_p( 20 ) = 3 nlat_p( 21 ) = 3 nlat_p( 22 ) = 3 nlat_p( 23 ) = 3 nlat_p( 24 ) = 3 nlat_p( 25 ) = 3 nlat_p( 26 ) = 3 nlat_p( 27 ) = 3 nlat_p( 28 ) = 3 nlat_p( 29 ) = 3 nlat_p( 30 ) = 3 nlat_p( 31 ) = 3 nlat_p( 32 ) = 3 nlat_p( 33 ) = 3 nlat_p( 34 ) = 3 nlat_p( 35 ) = 3 nlat_p( 36 ) = 3 nlat_p( 37 ) = 3 nlat_p( 38 ) = 3 nlat_p( 39 ) = 3 nlat_p( 40 ) = 3 nlat_p( 41 ) = 3 nlat_p( 42 ) = 3 nlat_p( 43 ) = 3 nlat_p( 44 ) = 3 nlat_p( 45 ) = 3 nlat_p( 46 ) = 3 nlat_p( 47 ) = 3 nlat_p( 48 ) = 3 nlat_p( 49 ) = 3 nlat_p( 50 ) = 3 nlat_p( 51 ) = 3 nlat_p( 52 ) = 3 nlat_p( 53 ) = 3 nlat_p( 54 ) = 3 nlat_p( 55 ) = 3 nlat_p( 56 ) = 3 nlat_p( 57 ) = 3 nlat_p( 58 ) = 3 nlat_p( 59 ) = 3 nlat_p( 60 ) = 3 nlat_p( 61 ) = 3 nlat_p( 62 ) = 3 nlat_p( 63 ) = 3