CAM atmosphere model initialization Read in cam_inparm namelist from: atm_in npr_y = 32 npr_z = 2 nprxy_x = 2 nprxy_y = 32 npes = 64 npes_yz= 64 npes_xy = 64 Decomposing tracers into 1 groups non-transpose geopk communication method = F Z-parallel non-transpose geopk communication method = F using multi-2d decomposition methodology modcomm transpose method = 0 modcomm geopk method = 0 modcomm gatscat method = 0 modc_sw_dynrun = 0 modc_hs_dynrun = T modc_send_dynrun = T modc_mxreq_dynrun = -1 modc_sw_cdcore = 0 modc_hs_cdcore = T modc_send_cdcore = T modc_mxreq_cdcore = -1 modc_sw_gather = 1 modc_hs_gather = T modc_send_gather = T modc_mxreq_gather = 64 modc_sw_scatter = 0 modc_hs_scatter = F modc_send_scatter = T modc_mxreq_scatter = -1 modc_sw_tracer = 0 modc_hs_tracer = T modc_send_tracer = T modc_mxreq_tracer = -1 modc_onetwo = 1 modc_tracers = 0 SWAP_COMM_SETOPTS: swap_comm_protocol = 4 swap_comm_maxreq = 128 FC_GATHER_SETOPTS: fc_gather_flow_cntl = 64 REPRO_SUM_SETOPTS: Using fixed-point-based (scalable) reproducible distributed sum algorithm and not comparing with floating point algorithms. constant co2 (vmr) for radiation = -1.000000000000000 cld_sediment_readnl: cldsed_ice_stokes_fac = 0.5000000000000000 solar_data_readnl: solar_data_file = /work/shared/noresm/inputdata/atm/cam/solar/SOLAR_TSI_Lean_1610-2140_annual_c100301.nc solar_data_readnl: solar_data_type = SERIAL solar_data_readnl: solar_data_ymd = 0 solar_data_readnl: solar_data_tod = 0 ------------------------------------------ *** INPUT VARIABLES (CAM_INPARM) *** ------------------------------------------ Initial run ********** CASE = NFAMIP2008AERAMIPO_f19_f19_02 ********** UNSET Initial dataset is: NF2005AERAMIPO_f19_f19_02.cam2.i.2006-01-01-00000.nc Topography dataset is: /work/shared/noresm/inputdata/atm/cam/topo/USGS-gtopo30_1.9x2.5_remap_c050602.nc Time-invariant (absorption/emissivity) factor dataset is: /work/shared/noresm/inputdata/atm/cam/rad/abs_ems_factors_fastvx.c030508.nc Run type flag (NSREST) 0=initial, 1=restart, 3=branch 0 Summary of restart module options: Restart pointer file is: ./rpointer.atm Initial conditions history files will be written yearly. Time filter coefficient (EPS) 0.060 DEL2 Horizontal diffusion coefficient (DIF2) 0.000E+00 DEL4 Horizontal diffusion coefficient (DIF4) 0.000E+00 Number of levels Courant limiter applied 5 Lowest level for dry adiabatic adjust (NLVDRY) 3 Frequency of Shortwave Radiation calc. (IRADSW) 2 Frequency of Longwave Radiation calc. (IRADLW) 2 Frequency of Absorptivity/Emissivity calc. (IRADAE) 24 ISCCP calcs and history IO will NOT be done ********** Time Manager Configuration ********** Calendar type: NO_LEAP Timestep size (seconds): 1800 Start date (yr mon day tod): 2006 1 1 0 Stop date (yr mon day tod): 2007 1 1 0 Reference date (yr mon day tod): 2006 1 1 0 Current step number: 0 Current date (yr mon day tod): 2006 1 1 0 ************************************************ init_chem_species -- species location pointers l_so2 = 7 l_dms = 6 l_qh2o2 = 8 l_so4_n = 9 l_so4_na = 10 l_so4_a1 = 11 l_so4_a2 = 12 l_so4_ac = 13 l_so4_pr = 14 l_bc_n = 15 l_bc_ax = 16 l_bc_ni = 17 l_bc_a = 18 l_bc_ai = 19 l_bc_ac = 20 l_om_ni = 21 l_om_ai = 22 l_om_ac = 23 l_dst_a2 = 24 l_dst_a3 = 25 l_ss_a1 = 26 l_ss_a2 = 27 l_ss_a3 = 28 Advected constituent list: 1 Q Specific humidity wet 2 CLDLIQ Grid box averaged cloud liquid amount wet 3 CLDICE Grid box averaged cloud ice amount wet 4 CLDLIX Aerosol calc averaged liquid condensate amount wet 5 CDNCIX Aerosol calc cloud droplet number concentration wet 6 DMS DMS wet 7 SO2 SO2 wet 8 H2O2 H2O2 wet 9 SO4_N SO4_N wet 10 SO4_NA SO4_NA wet 11 SO4_A1 SO4_A1 wet 12 SO4_A2 SO4_A2 wet 13 SO4_AC SO4_AC wet 14 SO4_PR SO4_PR wet 15 BC_N BC_N wet 16 BC_AX BC_AX wet 17 BC_NI BC_NI wet 18 BC_A BC_A wet 19 BC_AI BC_AI wet 20 BC_AC BC_AC wet 21 OM_NI OM_NI wet 22 OM_AI OM_AI wet 23 OM_AC OM_AC wet 24 DST_A2 DST_A2 wet 25 DST_A3 DST_A3 wet 26 SS_A1 SS_A1 wet 27 SS_A2 SS_A2 wet 28 SS_A3 SS_A3 wet Fields in physics buffer name, scope, fdim, mdim, ldim TEOUT global 1 1 1 DTCORE global 1 26 1 QCWAT global 1 26 1 LCWAT global 1 26 1 LCWATX global 1 26 1 TCWAT global 1 26 1 CLD global 1 26 1 CONCLD global 1 26 1 CLDO global 1 26 1 QINI physpkg 1 26 28 TINI physpkg 1 26 1 QME physpkg 1 26 1 PRAIN physpkg 1 26 1 NEVAPR physpkg 1 26 1 REI physpkg 1 26 1 REL physpkg 1 26 1 REL_FN physpkg 1 26 1 DEI physpkg 1 26 1 MU physpkg 1 26 1 LAMBDAC physpkg 1 26 1 ICIWP physpkg 1 26 1 ICLWP physpkg 1 26 1 ozone physpkg 1 26 1 sulf physpkg 1 26 1 bcar1 physpkg 1 26 1 bcar2 physpkg 1 26 1 ocar1 physpkg 1 26 1 ocar2 physpkg 1 26 1 sslt1 physpkg 1 26 1 sslt2 physpkg 1 26 1 sslt3 physpkg 1 26 1 sslt4 physpkg 1 26 1 dust1 physpkg 1 26 1 dust2 physpkg 1 26 1 dust3 physpkg 1 26 1 dust4 physpkg 1 26 1 SSLTA physpkg 1 26 1 SSLTC physpkg 1 26 1 N2O physpkg 1 26 1 CH4 physpkg 1 26 1 CFC11 physpkg 1 26 1 CFC12 physpkg 1 26 1 CO2 physpkg 1 26 1 O2 physpkg 1 26 1 FRACIS physpkg 1 26 28 ICWMRDP physpkg 1 26 1 RPRDDP physpkg 1 26 1 ICWMRSH physpkg 1 26 1 RPRDSH physpkg 1 26 1 RPRDTOT physpkg 1 26 1 CLDTOP physpkg 1 1 1 CLDBOT physpkg 1 1 1 cush global 1 1 1 QRS global 1 26 1 QRL global 1 26 1 tke global 1 27 1 kvh global 1 27 1 kvm global 1 27 1 wgustd global 1 1 1 Using io_type NETCDF with stride 8 and 8 io tasks CAM PIO parameter settings... io_stride = 8 iotype_name = netcdf num_iotasks = 8 (GETFIL): attempting to find local file NF2005AERAMIPO_f19_f19_02.cam2.i.2006-01-01-00000.nc (GETFIL): all tries to get file have been unsuccessful: NF2005AERAMIPO_f19_f19_02.cam2.i.2006-01-01-00000.nc ENDRUN: GETFIL: FAILED to get NF2005AERAMIPO_f19_f19_02.cam2.i.2006-01-01-00000.nc